STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPTSSBSerine palmitoyltransferase small subunit B. (110 aa)    
Predicted Functional Partners:
SPTLC1
Serine palmitoyltransferase long chain base subunit 1.
    
 0.893
SPTLC3
Serine palmitoyltransferase long chain base subunit 3.
    
 0.860
SPTLC2
Serine palmitoyltransferase long chain base subunit 2.
    
 0.832
SLC6A18
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
      
 0.687
GAL3ST4
Galactose-3-O-sulfotransferase 4.
      
 0.669
ORMDL2
ORM1-like protein; Negative regulator of sphingolipid synthesis.
     
 0.628
ORMDL1
ORM1-like protein; Negative regulator of sphingolipid synthesis.
     
 0.628
ORMDL3
ORM1-like protein; Negative regulator of sphingolipid synthesis.
     
 0.628
SLC10A6
Solute carrier family 10 member 6.
      
 0.549
PLCH2
Phosphoinositide phospholipase C.
      
 0.543
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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