STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMSS1Cms1 ribosomal small subunit homolog. (279 aa)    
Predicted Functional Partners:
NOP53
Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family.
   
    0.813
LTV1
LTV1 ribosome biogenesis factor.
   
  
 0.789
BYSL
Uncharacterized protein.
   
  
 0.721
GOLPH3L
Golgi phosphoprotein 3 like.
      
 0.670
UTP23
UTP23 small subunit processome component.
   
    0.653
NIFK
Nucleolar protein interacting with the FHA domain of MKI67.
   
    0.652
NOL10
Nucleolar protein 10 isoform 1.
   
  
 0.642
ESF1
ESF1 nucleolar pre-rRNA processing protein homolog.
   
    0.635
RPF2
Ribosome production factor 2 homolog.
   
   0.623
RBM28
RNA binding motif protein 28.
   
    0.619
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.