STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TDRKHTudor and KH domain containing. (611 aa)    
Predicted Functional Partners:
PLD6
Phospholipase D family member 6.
    
 
 0.818
GOLGA7B
Golgin A7 family member B.
   
  
 0.670
ASZ1
Ankyrin repeat, SAM and basic leucine zipper domain containing 1.
   
 
 0.666
MOV10
Mov10 RISC complex RNA helicase.
    
 
 0.657
MEAK7
MTOR associated protein, eak-7 homolog.
      
 0.654
PIWIL2
Piwi like RNA-mediated gene silencing 2; Belongs to the argonaute family.
   
 
 0.632
DHX32
DEAH-box helicase 32 (putative).
    
 
 0.574
MXRA8
Matrix remodeling-associated protein 8 isoform 2.
      
 0.573
AGFG1
Arf-GAP domain and FG repeat-containing protein 1 isoform X1.
      
 0.558
DHX37
DEAH-box helicase 37.
    
 
 0.535
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.