STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT15Keratin 15; Belongs to the intermediate filament family. (526 aa)    
Predicted Functional Partners:
LRIG1
Leucine rich repeats and immunoglobulin like domains 1.
   
 
 0.683
LGR6
Leucine rich repeat containing G protein-coupled receptor 6.
      
 0.664
KRT4
Keratin 4; Belongs to the intermediate filament family.
  
 
0.628
LYPD3
Ly6/PLAUR domain-containing protein 3.
   
  
 0.564
CCDC153
Coiled-coil domain containing 153.
      
 0.518
ALDH1A1
Aldehyde dehydrogenase 1 family member A1; Belongs to the aldehyde dehydrogenase family.
   
 
 0.485
CCDC113
Coiled-coil domain containing 113.
   
  
 0.482
KRT14
Keratin 14; Belongs to the intermediate filament family.
  
 
0.478
C15orf48
Chromosome 15 open reading frame 48.
      
 0.463
KRT27
IF rod domain-containing protein; Belongs to the intermediate filament family.
   
0.444
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.