STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM129Transmembrane protein 129. (438 aa)    
Predicted Functional Partners:
TMEM161B
Transmembrane protein 161B.
      
 0.676
LOC100515533
SLBP_RNA_bind domain-containing protein.
  
  
0.668
FAM155A
Family with sequence similarity 155 member A.
      
 0.648
KBTBD12
Kelch repeat and BTB domain-containing protein 12 isoform X1.
      
 0.558
CWC22
CWC22 spliceosome associated protein homolog.
      
 0.546
CPNE4
Copine-4 isoform 1.
      
 0.545
TAFA2
TAFA chemokine like family member 2.
      
 0.538
PEX6
Peroxisomal biogenesis factor 6.
   
   0.534
TOMM70
Translocase of outer mitochondrial membrane 70.
      
 0.531
TMEM117
Transmembrane protein 117 isoform X1.
      
 0.509
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.