Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHL30069.1 | SHL30106.1 | SAMN05443543_101216 | SAMN05443543_101218 | LysM domain-containing protein. | Hypothetical protein. | 0.525 |
SHL30069.1 | acdS | SAMN05443543_101216 | SAMN05443543_101217 | LysM domain-containing protein. | 1-aminocyclopropane-1-carboxylate deaminase. | 0.915 |
SHL30069.1 | hemL | SAMN05443543_101216 | SAMN05443543_101215 | LysM domain-containing protein. | Glutamate-1-semialdehyde 2,1-aminomutase. | 0.686 |
SHL30106.1 | SHL30069.1 | SAMN05443543_101218 | SAMN05443543_101216 | Hypothetical protein. | LysM domain-containing protein. | 0.525 |
SHL30106.1 | SHL30120.1 | SAMN05443543_101218 | SAMN05443543_101219 | Hypothetical protein. | Hypothetical protein. | 0.611 |
SHL30106.1 | SHL30138.1 | SAMN05443543_101218 | SAMN05443543_101220 | Hypothetical protein. | Protein of unknown function. | 0.551 |
SHL30106.1 | SHL30218.1 | SAMN05443543_101218 | SAMN05443543_101224 | Hypothetical protein. | Protein of unknown function. | 0.560 |
SHL30106.1 | SHL53716.1 | SAMN05443543_101218 | SAMN05443543_102442 | Hypothetical protein. | Hypothetical protein. | 0.439 |
SHL30106.1 | SHL82345.1 | SAMN05443543_101218 | SAMN05443543_105199 | Hypothetical protein. | Hpt domain-containing protein. | 0.467 |
SHL30106.1 | acdS | SAMN05443543_101218 | SAMN05443543_101217 | Hypothetical protein. | 1-aminocyclopropane-1-carboxylate deaminase. | 0.590 |
SHL30106.1 | hemL | SAMN05443543_101218 | SAMN05443543_101215 | Hypothetical protein. | Glutamate-1-semialdehyde 2,1-aminomutase. | 0.520 |
SHL30120.1 | SHL30106.1 | SAMN05443543_101219 | SAMN05443543_101218 | Hypothetical protein. | Hypothetical protein. | 0.611 |
SHL30120.1 | SHL30138.1 | SAMN05443543_101219 | SAMN05443543_101220 | Hypothetical protein. | Protein of unknown function. | 0.597 |
SHL30120.1 | acdS | SAMN05443543_101219 | SAMN05443543_101217 | Hypothetical protein. | 1-aminocyclopropane-1-carboxylate deaminase. | 0.405 |
SHL30138.1 | SHL30106.1 | SAMN05443543_101220 | SAMN05443543_101218 | Protein of unknown function. | Hypothetical protein. | 0.551 |
SHL30138.1 | SHL30120.1 | SAMN05443543_101220 | SAMN05443543_101219 | Protein of unknown function. | Hypothetical protein. | 0.597 |
SHL30138.1 | SHL30218.1 | SAMN05443543_101220 | SAMN05443543_101224 | Protein of unknown function. | Protein of unknown function. | 0.427 |
SHL30138.1 | acdS | SAMN05443543_101220 | SAMN05443543_101217 | Protein of unknown function. | 1-aminocyclopropane-1-carboxylate deaminase. | 0.451 |
SHL30218.1 | SHL30106.1 | SAMN05443543_101224 | SAMN05443543_101218 | Protein of unknown function. | Hypothetical protein. | 0.560 |
SHL30218.1 | SHL30138.1 | SAMN05443543_101224 | SAMN05443543_101220 | Protein of unknown function. | Protein of unknown function. | 0.427 |
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