Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHL34130.1 | SHL34149.1 | SAMN05443543_101412 | SAMN05443543_101413 | Hypothetical protein. | Putative zinc-or iron-chelating domain-containing protein. | 0.533 |
SHL34130.1 | SHL37913.1 | SAMN05443543_101412 | SAMN05443543_101590 | Hypothetical protein. | Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase. | 0.528 |
SHL34130.1 | SHL44902.1 | SAMN05443543_101412 | SAMN05443543_10228 | Hypothetical protein. | Protein of unknown function. | 0.671 |
SHL34130.1 | SHL48954.1 | SAMN05443543_101412 | SAMN05443543_102215 | Hypothetical protein. | Putative DNA-binding domain-containing protein. | 0.545 |
SHL34130.1 | SHL51465.1 | SAMN05443543_101412 | SAMN05443543_102330 | Hypothetical protein. | Hypothetical protein. | 0.706 |
SHL34130.1 | SHL53716.1 | SAMN05443543_101412 | SAMN05443543_102442 | Hypothetical protein. | Hypothetical protein. | 0.560 |
SHL34130.1 | SHL71171.1 | SAMN05443543_101412 | SAMN05443543_10447 | Hypothetical protein. | Aspartyl protease. | 0.582 |
SHL34130.1 | SHL83095.1 | SAMN05443543_101412 | SAMN05443543_105242 | Hypothetical protein. | Hypothetical protein. | 0.613 |
SHL34130.1 | SHM00463.1 | SAMN05443543_101412 | SAMN05443543_108192 | Hypothetical protein. | Hypothetical protein. | 0.518 |
SHL34130.1 | SHM07332.1 | SAMN05443543_101412 | SAMN05443543_11023 | Hypothetical protein. | Hypothetical protein. | 0.686 |
SHL34149.1 | SHL34130.1 | SAMN05443543_101413 | SAMN05443543_101412 | Putative zinc-or iron-chelating domain-containing protein. | Hypothetical protein. | 0.533 |
SHL37913.1 | SHL34130.1 | SAMN05443543_101590 | SAMN05443543_101412 | Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase. | Hypothetical protein. | 0.528 |
SHL37913.1 | SHL44902.1 | SAMN05443543_101590 | SAMN05443543_10228 | Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase. | Protein of unknown function. | 0.679 |
SHL37913.1 | SHL48954.1 | SAMN05443543_101590 | SAMN05443543_102215 | Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase. | Putative DNA-binding domain-containing protein. | 0.723 |
SHL37913.1 | SHL51465.1 | SAMN05443543_101590 | SAMN05443543_102330 | Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase. | Hypothetical protein. | 0.691 |
SHL37913.1 | SHL71171.1 | SAMN05443543_101590 | SAMN05443543_10447 | Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase. | Aspartyl protease. | 0.403 |
SHL37913.1 | SHL83095.1 | SAMN05443543_101590 | SAMN05443543_105242 | Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase. | Hypothetical protein. | 0.743 |
SHL44902.1 | SHL34130.1 | SAMN05443543_10228 | SAMN05443543_101412 | Protein of unknown function. | Hypothetical protein. | 0.671 |
SHL44902.1 | SHL37913.1 | SAMN05443543_10228 | SAMN05443543_101590 | Protein of unknown function. | Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase. | 0.679 |
SHL44902.1 | SHL48954.1 | SAMN05443543_10228 | SAMN05443543_102215 | Protein of unknown function. | Putative DNA-binding domain-containing protein. | 0.759 |
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