STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aqpZAquaporin Z; Belongs to the MIP/aquaporin (TC 1.A.8) family. (235 aa)    
Predicted Functional Partners:
glpK2
Glycerol kinase; Belongs to the FGGY kinase family.
  
 0.957
glpA
Glycerol-3-phosphate dehydrogenase.
  
  
 0.820
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
  
 
 0.771
SHL27426.1
Uncharacterized membrane protein.
       0.690
ppiC
Peptidyl-prolyl cis-trans isomerase A (cyclophilin A).
    
   0.669
ppiA_2
Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family.
    
   0.669
ppiA_1
Peptidylprolyl isomerase.
    
   0.669
SHL30928.1
L-glyceraldehyde 3-phosphate reductase.
   
   0.637
tas
Predicted oxidoreductase.
   
   0.637
SHL80324.1
Predicted oxidoreductase.
   
   0.637
Your Current Organism:
Flavobacterium flevense
NCBI taxonomy Id: 983
Other names: ATCC 27944, CCUG 14832, CIP 104740, Cytophaga flevensis, F. flevense, IFO 14960, JCM 21143, LMG 8328, LMG:8328, NBRC 14960
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.