Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHL27526.1 | SHL50760.1 | SAMN05443543_10180 | SAMN05443543_102299 | Signal transduction histidine kinase. | Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB. | 0.746 |
SHL27526.1 | SHL50804.1 | SAMN05443543_10180 | SAMN05443543_102301 | Signal transduction histidine kinase. | Hypothetical protein. | 0.918 |
SHL27526.1 | SHL50830.1 | SAMN05443543_10180 | SAMN05443543_102302 | Signal transduction histidine kinase. | Tetratricopeptide repeat-containing protein. | 0.918 |
SHL27526.1 | SHL60314.1 | SAMN05443543_10180 | SAMN05443543_10353 | Signal transduction histidine kinase. | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. | 0.999 |
SHL27526.1 | SHL65722.1 | SAMN05443543_10180 | SAMN05443543_103296 | Signal transduction histidine kinase. | Hypothetical protein. | 0.999 |
SHL27526.1 | SHM08625.1 | SAMN05443543_10180 | SAMN05443543_11082 | Signal transduction histidine kinase. | Tetratricopeptide repeat-containing protein. | 0.919 |
SHL27526.1 | SHM08882.1 | SAMN05443543_10180 | SAMN05443543_11093 | Signal transduction histidine kinase. | Two-component system, chemotaxis family, CheB/CheR fusion protein. | 0.999 |
SHL50760.1 | SHL27526.1 | SAMN05443543_102299 | SAMN05443543_10180 | Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB. | Signal transduction histidine kinase. | 0.746 |
SHL50760.1 | SHL50787.1 | SAMN05443543_102299 | SAMN05443543_102300 | Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB. | Protein of unknown function. | 0.784 |
SHL50760.1 | SHL50804.1 | SAMN05443543_102299 | SAMN05443543_102301 | Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB. | Hypothetical protein. | 0.864 |
SHL50760.1 | SHL50830.1 | SAMN05443543_102299 | SAMN05443543_102302 | Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB. | Tetratricopeptide repeat-containing protein. | 0.858 |
SHL50760.1 | SHL50849.1 | SAMN05443543_102299 | SAMN05443543_102303 | Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB. | Glucose-1-phosphate thymidylyltransferase. | 0.616 |
SHL50760.1 | SHL60314.1 | SAMN05443543_102299 | SAMN05443543_10353 | Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB. | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. | 0.627 |
SHL50760.1 | SHL65722.1 | SAMN05443543_102299 | SAMN05443543_103296 | Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB. | Hypothetical protein. | 0.764 |
SHL50760.1 | SHM08625.1 | SAMN05443543_102299 | SAMN05443543_11082 | Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB. | Tetratricopeptide repeat-containing protein. | 0.614 |
SHL50760.1 | SHM08882.1 | SAMN05443543_102299 | SAMN05443543_11093 | Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB. | Two-component system, chemotaxis family, CheB/CheR fusion protein. | 0.791 |
SHL50760.1 | ftsX | SAMN05443543_102299 | SAMN05443543_10239 | Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB. | Cell division protein FtsX; Required for cell division and gliding motility. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. | 0.897 |
SHL50787.1 | SHL50760.1 | SAMN05443543_102300 | SAMN05443543_102299 | Protein of unknown function. | Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB. | 0.784 |
SHL50787.1 | SHL50804.1 | SAMN05443543_102300 | SAMN05443543_102301 | Protein of unknown function. | Hypothetical protein. | 0.839 |
SHL50787.1 | SHL50830.1 | SAMN05443543_102300 | SAMN05443543_102302 | Protein of unknown function. | Tetratricopeptide repeat-containing protein. | 0.822 |
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