Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHL28289.1 | SHL52710.1 | SAMN05443543_101117 | SAMN05443543_102389 | Hypothetical protein. | Hypothetical protein. | 0.406 |
SHL28289.1 | SHL83302.1 | SAMN05443543_101117 | SAMN05443543_105253 | Hypothetical protein. | Hypothetical protein. | 0.531 |
SHL28289.1 | SHL99342.1 | SAMN05443543_101117 | SAMN05443543_108132 | Hypothetical protein. | Na+-driven multidrug efflux pump. | 0.436 |
SHL51076.1 | SHL52710.1 | SAMN05443543_102313 | SAMN05443543_102389 | Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter. | Hypothetical protein. | 0.550 |
SHL51076.1 | SHM00105.1 | SAMN05443543_102313 | SAMN05443543_108174 | Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter. | Hypothetical protein. | 0.491 |
SHL52669.1 | SHL52710.1 | SAMN05443543_102387 | SAMN05443543_102389 | Cytochrome c. | Hypothetical protein. | 0.494 |
SHL52669.1 | hemB | SAMN05443543_102387 | SAMN05443543_102388 | Cytochrome c. | Porphobilinogen synthase; Belongs to the ALAD family. | 0.601 |
SHL52710.1 | SHL28289.1 | SAMN05443543_102389 | SAMN05443543_101117 | Hypothetical protein. | Hypothetical protein. | 0.406 |
SHL52710.1 | SHL51076.1 | SAMN05443543_102389 | SAMN05443543_102313 | Hypothetical protein. | Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter. | 0.550 |
SHL52710.1 | SHL52669.1 | SAMN05443543_102389 | SAMN05443543_102387 | Hypothetical protein. | Cytochrome c. | 0.494 |
SHL52710.1 | SHL52730.1 | SAMN05443543_102389 | SAMN05443543_102390 | Hypothetical protein. | Hypothetical protein. | 0.799 |
SHL52710.1 | SHL60883.1 | SAMN05443543_102389 | SAMN05443543_10380 | Hypothetical protein. | Por secretion system C-terminal sorting domain-containing protein. | 0.407 |
SHL52710.1 | SHL83283.1 | SAMN05443543_102389 | SAMN05443543_105252 | Hypothetical protein. | Protein of unknown function. | 0.459 |
SHL52710.1 | SHL83302.1 | SAMN05443543_102389 | SAMN05443543_105253 | Hypothetical protein. | Hypothetical protein. | 0.434 |
SHL52710.1 | SHL99342.1 | SAMN05443543_102389 | SAMN05443543_108132 | Hypothetical protein. | Na+-driven multidrug efflux pump. | 0.561 |
SHL52710.1 | SHM00105.1 | SAMN05443543_102389 | SAMN05443543_108174 | Hypothetical protein. | Hypothetical protein. | 0.722 |
SHL52710.1 | hemB | SAMN05443543_102389 | SAMN05443543_102388 | Hypothetical protein. | Porphobilinogen synthase; Belongs to the ALAD family. | 0.499 |
SHL52730.1 | SHL52710.1 | SAMN05443543_102390 | SAMN05443543_102389 | Hypothetical protein. | Hypothetical protein. | 0.799 |
SHL52730.1 | hemB | SAMN05443543_102390 | SAMN05443543_102388 | Hypothetical protein. | Porphobilinogen synthase; Belongs to the ALAD family. | 0.499 |
SHL60883.1 | SHL52710.1 | SAMN05443543_10380 | SAMN05443543_102389 | Por secretion system C-terminal sorting domain-containing protein. | Hypothetical protein. | 0.407 |
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