STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHL80868.1Hypothetical protein. (200 aa)    
Predicted Functional Partners:
SHL80379.1
L-lactate dehydrogenase complex protein LldF.
  
 
 0.847
cdsA
Phosphatidate cytidylyltransferase.
       0.836
psd
Phosphatidylserine decarboxylase.
       0.836
SHL80922.1
Acyl-CoA-binding protein.
       0.836
SHM04724.1
Hypothetical protein.
  
     0.751
SHL66591.1
Hypothetical protein.
  
 
 0.745
SHL81591.1
pRiA4b ORF-3-like protein.
  
     0.732
SHL93018.1
Family of unknown function.
  
     0.732
SHL80946.1
Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
       0.729
SHL29668.1
Putative porin.
  
     0.721
Your Current Organism:
Flavobacterium flevense
NCBI taxonomy Id: 983
Other names: ATCC 27944, CCUG 14832, CIP 104740, Cytophaga flevensis, F. flevense, IFO 14960, JCM 21143, LMG 8328, LMG:8328, NBRC 14960
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.