STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHL81496.1AhpC/TSA family protein. (158 aa)    
Predicted Functional Partners:
msrA
Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
   
 0.971
SHL81486.1
Peroxiredoxin.
 
     0.915
SHL28468.1
Alkyl hydroperoxide reductase subunit AhpC (peroxiredoxin).
  
 0.824
lpdA1
Dihydrolipoamide dehydrogenase.
   
 0.824
SHL66718.1
Peroxiredoxin (alkyl hydroperoxide reductase subunit C).
  
 0.824
lpdA2
Dihydrolipoamide dehydrogenase.
   
 0.824
SHL65027.1
Protein of unknown function.
   
 0.779
mrsA
Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
   
 0.774
SHL54470.1
Protein of unknown function, DUF255.
  
 
 0.673
dsbD
Thiol:disulfide interchange protein DsbD.
  
 
 0.673
Your Current Organism:
Flavobacterium flevense
NCBI taxonomy Id: 983
Other names: ATCC 27944, CCUG 14832, CIP 104740, Cytophaga flevensis, F. flevense, IFO 14960, JCM 21143, LMG 8328, LMG:8328, NBRC 14960
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.