STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHL82067.1Gliding motility-associated C-terminal domain-containing protein. (1357 aa)    
Predicted Functional Partners:
SHM00767.1
Aspartyl protease.
  
  0.711
SHL82047.1
Radical SAM superfamily enzyme YgiQ, UPF0313 family.
 
     0.610
aspC1
Aspartate aminotransferase.
   
 
  0.513
aspC2
Aspartate aminotransferase.
   
 
  0.513
SHL61499.1
Peptidase family S41.
  
  0.486
SHL55880.1
Por secretion system C-terminal sorting domain-containing protein.
  
 
  0.433
SHM07791.1
Por secretion system C-terminal sorting domain-containing protein.
  
 
   0.432
SHM02883.1
Beta-carotene 3-hydroxylase.
  
     0.429
Your Current Organism:
Flavobacterium flevense
NCBI taxonomy Id: 983
Other names: ATCC 27944, CCUG 14832, CIP 104740, Cytophaga flevensis, F. flevense, IFO 14960, JCM 21143, LMG 8328, LMG:8328, NBRC 14960
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