Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHL83180.1 | SHL83242.1 | SAMN05443543_105246 | SAMN05443543_105250 | UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase. | Phosphomannomutase. | 0.656 |
SHL83180.1 | SHL88565.1 | SAMN05443543_105246 | SAMN05443543_106173 | UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase. | Phosphomannomutase. | 0.783 |
SHL83180.1 | SHL99203.1 | SAMN05443543_105246 | SAMN05443543_108124 | UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase. | CBS domain-containing protein. | 0.673 |
SHL83180.1 | atpE | SAMN05443543_105246 | SAMN05443543_102310 | UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase. | ATP synthase F0 subcomplex C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.658 |
SHL83180.1 | glmS | SAMN05443543_105246 | SAMN05443543_102552 | UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase. | Glucosamine--fructose-6-phosphate aminotransferase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.664 |
SHL83180.1 | murA | SAMN05443543_105246 | SAMN05443543_105266 | UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase. | UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | 0.687 |
SHL83180.1 | prsA | SAMN05443543_105246 | SAMN05443543_102573 | UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase. | Ribose-phosphate pyrophosphokinase. | 0.789 |
SHL83180.1 | pta | SAMN05443543_105246 | SAMN05443543_103290 | UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase. | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 0.880 |
SHL83180.1 | rmlB | SAMN05443543_105246 | SAMN05443543_108147 | UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase. | dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. | 0.917 |
SHL83180.1 | yeeZ | SAMN05443543_105246 | SAMN05443543_102504 | UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase. | Nucleoside-diphosphate-sugar epimerase. | 0.786 |
SHL83242.1 | SHL83180.1 | SAMN05443543_105250 | SAMN05443543_105246 | Phosphomannomutase. | UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase. | 0.656 |
SHL83242.1 | SHL99203.1 | SAMN05443543_105250 | SAMN05443543_108124 | Phosphomannomutase. | CBS domain-containing protein. | 0.683 |
SHL83242.1 | glmS | SAMN05443543_105250 | SAMN05443543_102552 | Phosphomannomutase. | Glucosamine--fructose-6-phosphate aminotransferase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.530 |
SHL83242.1 | prsA | SAMN05443543_105250 | SAMN05443543_102573 | Phosphomannomutase. | Ribose-phosphate pyrophosphokinase. | 0.926 |
SHL88565.1 | SHL83180.1 | SAMN05443543_106173 | SAMN05443543_105246 | Phosphomannomutase. | UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase. | 0.783 |
SHL88565.1 | SHL99203.1 | SAMN05443543_106173 | SAMN05443543_108124 | Phosphomannomutase. | CBS domain-containing protein. | 0.961 |
SHL88565.1 | atpE | SAMN05443543_106173 | SAMN05443543_102310 | Phosphomannomutase. | ATP synthase F0 subcomplex C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.518 |
SHL88565.1 | glmS | SAMN05443543_106173 | SAMN05443543_102552 | Phosphomannomutase. | Glucosamine--fructose-6-phosphate aminotransferase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.914 |
SHL88565.1 | prsA | SAMN05443543_106173 | SAMN05443543_102573 | Phosphomannomutase. | Ribose-phosphate pyrophosphokinase. | 0.502 |
SHL99203.1 | SHL83180.1 | SAMN05443543_108124 | SAMN05443543_105246 | CBS domain-containing protein. | UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase. | 0.673 |
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