STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHL89042.1Nitroreductase / dihydropteridine reductase. (200 aa)    
Predicted Functional Partners:
SHL32149.1
Pterin-4-alpha-carbinolamine dehydratase.
   
 
  0.751
SHL89031.1
Luciferase family oxidoreductase, group 1.
  
 
 0.676
menE
O-succinylbenzoic acid--CoA ligase.
   
   0.673
SHL49923.1
2,4-dienoyl-CoA reductase.
  
 
  0.670
SHL92019.1
N-ethylmaleimide reductase.
  
 
  0.670
thiF
Adenylyltransferase and sulfurtransferase.
    
  0.604
SHL94600.1
Adenylyltransferase and sulfurtransferase.
    
  0.604
ribBA
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
 
 0.542
SHM12319.1
Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase /cob(II)yrinic acid a,c-diamide reductase.
  
 
 0.509
cobS
Cobalamin-5'-phosphate synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.
    
 0.507
Your Current Organism:
Flavobacterium flevense
NCBI taxonomy Id: 983
Other names: ATCC 27944, CCUG 14832, CIP 104740, Cytophaga flevensis, F. flevense, IFO 14960, JCM 21143, LMG 8328, LMG:8328, NBRC 14960
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