Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHL35945.1 | SHL71465.1 | SAMN05443543_101493 | SAMN05443543_10462 | Glycosyl hydrolases family 43. | Glycosyl hydrolases family 43. | 0.659 |
SHL35945.1 | SHL80600.1 | SAMN05443543_101493 | SAMN05443543_105102 | Glycosyl hydrolases family 43. | Glycosyl hydrolases family 43. | 0.643 |
SHL35945.1 | SHM05780.1 | SAMN05443543_101493 | SAMN05443543_109172 | Glycosyl hydrolases family 43. | alpha-N-arabinofuranosidase. | 0.734 |
SHL35945.1 | xynD_2 | SAMN05443543_101493 | SAMN05443543_106219 | Glycosyl hydrolases family 43. | Carbohydrate binding module (family 6); Belongs to the glycosyl hydrolase 43 family. | 0.722 |
SHL35945.1 | xynD_3 | SAMN05443543_101493 | SAMN05443543_106217 | Glycosyl hydrolases family 43. | Carbohydrate binding module (family 6); Belongs to the glycosyl hydrolase 43 family. | 0.722 |
SHL71465.1 | SHL35945.1 | SAMN05443543_10462 | SAMN05443543_101493 | Glycosyl hydrolases family 43. | Glycosyl hydrolases family 43. | 0.659 |
SHL71465.1 | SHM05780.1 | SAMN05443543_10462 | SAMN05443543_109172 | Glycosyl hydrolases family 43. | alpha-N-arabinofuranosidase. | 0.812 |
SHL71465.1 | xynD_2 | SAMN05443543_10462 | SAMN05443543_106219 | Glycosyl hydrolases family 43. | Carbohydrate binding module (family 6); Belongs to the glycosyl hydrolase 43 family. | 0.676 |
SHL71465.1 | xynD_3 | SAMN05443543_10462 | SAMN05443543_106217 | Glycosyl hydrolases family 43. | Carbohydrate binding module (family 6); Belongs to the glycosyl hydrolase 43 family. | 0.677 |
SHL80600.1 | SHL35945.1 | SAMN05443543_105102 | SAMN05443543_101493 | Glycosyl hydrolases family 43. | Glycosyl hydrolases family 43. | 0.643 |
SHL80600.1 | SHM05780.1 | SAMN05443543_105102 | SAMN05443543_109172 | Glycosyl hydrolases family 43. | alpha-N-arabinofuranosidase. | 0.826 |
SHL80600.1 | xynD_2 | SAMN05443543_105102 | SAMN05443543_106219 | Glycosyl hydrolases family 43. | Carbohydrate binding module (family 6); Belongs to the glycosyl hydrolase 43 family. | 0.670 |
SHL80600.1 | xynD_3 | SAMN05443543_105102 | SAMN05443543_106217 | Glycosyl hydrolases family 43. | Carbohydrate binding module (family 6); Belongs to the glycosyl hydrolase 43 family. | 0.669 |
SHL89150.1 | SHL89327.1 | SAMN05443543_106208 | SAMN05443543_106218 | Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family. | Glycosyl-hydrolase 97 C-terminal, oligomerisation. | 0.572 |
SHL89150.1 | SHL89369.1 | SAMN05443543_106208 | SAMN05443543_106220 | Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family. | alpha-N-arabinofuranosidase; Belongs to the glycosyl hydrolase 43 family. | 0.405 |
SHL89150.1 | xynD_2 | SAMN05443543_106208 | SAMN05443543_106219 | Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family. | Carbohydrate binding module (family 6); Belongs to the glycosyl hydrolase 43 family. | 0.805 |
SHL89150.1 | xynD_3 | SAMN05443543_106208 | SAMN05443543_106217 | Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family. | Carbohydrate binding module (family 6); Belongs to the glycosyl hydrolase 43 family. | 0.801 |
SHL89289.1 | SHL89327.1 | SAMN05443543_106216 | SAMN05443543_106218 | Protein of unknown function. | Glycosyl-hydrolase 97 C-terminal, oligomerisation. | 0.651 |
SHL89289.1 | SHL89369.1 | SAMN05443543_106216 | SAMN05443543_106220 | Protein of unknown function. | alpha-N-arabinofuranosidase; Belongs to the glycosyl hydrolase 43 family. | 0.414 |
SHL89289.1 | xynD_2 | SAMN05443543_106216 | SAMN05443543_106219 | Protein of unknown function. | Carbohydrate binding module (family 6); Belongs to the glycosyl hydrolase 43 family. | 0.651 |
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