Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHL61304.1 | SHL94806.1 | SAMN05443543_10398 | SAMN05443543_107186 | Dihydrofolate reductase. | DoxX-like family protein. | 0.428 |
SHL62555.1 | SHL62580.1 | SAMN05443543_103159 | SAMN05443543_103160 | Transcriptional regulator GlxA family, contains an amidase domain and an AraC-type DNA-binding HTH domain. | Activator of Hsp90 ATPase homolog 1-like protein. | 0.736 |
SHL62555.1 | SHL62602.1 | SAMN05443543_103159 | SAMN05443543_103161 | Transcriptional regulator GlxA family, contains an amidase domain and an AraC-type DNA-binding HTH domain. | Hypothetical protein. | 0.737 |
SHL62555.1 | SHL94782.1 | SAMN05443543_103159 | SAMN05443543_107185 | Transcriptional regulator GlxA family, contains an amidase domain and an AraC-type DNA-binding HTH domain. | Hypothetical protein. | 0.452 |
SHL62555.1 | SHL94806.1 | SAMN05443543_103159 | SAMN05443543_107186 | Transcriptional regulator GlxA family, contains an amidase domain and an AraC-type DNA-binding HTH domain. | DoxX-like family protein. | 0.568 |
SHL62580.1 | SHL62555.1 | SAMN05443543_103160 | SAMN05443543_103159 | Activator of Hsp90 ATPase homolog 1-like protein. | Transcriptional regulator GlxA family, contains an amidase domain and an AraC-type DNA-binding HTH domain. | 0.736 |
SHL62580.1 | SHL62602.1 | SAMN05443543_103160 | SAMN05443543_103161 | Activator of Hsp90 ATPase homolog 1-like protein. | Hypothetical protein. | 0.815 |
SHL62580.1 | SHL94806.1 | SAMN05443543_103160 | SAMN05443543_107186 | Activator of Hsp90 ATPase homolog 1-like protein. | DoxX-like family protein. | 0.431 |
SHL62602.1 | SHL62555.1 | SAMN05443543_103161 | SAMN05443543_103159 | Hypothetical protein. | Transcriptional regulator GlxA family, contains an amidase domain and an AraC-type DNA-binding HTH domain. | 0.737 |
SHL62602.1 | SHL62580.1 | SAMN05443543_103161 | SAMN05443543_103160 | Hypothetical protein. | Activator of Hsp90 ATPase homolog 1-like protein. | 0.815 |
SHL62602.1 | SHL94806.1 | SAMN05443543_103161 | SAMN05443543_107186 | Hypothetical protein. | DoxX-like family protein. | 0.424 |
SHL66015.1 | SHL94806.1 | SAMN05443543_103309 | SAMN05443543_107186 | RNA polymerase, alpha chain C terminal domain. | DoxX-like family protein. | 0.427 |
SHL94782.1 | SHL62555.1 | SAMN05443543_107185 | SAMN05443543_103159 | Hypothetical protein. | Transcriptional regulator GlxA family, contains an amidase domain and an AraC-type DNA-binding HTH domain. | 0.452 |
SHL94782.1 | SHL94806.1 | SAMN05443543_107185 | SAMN05443543_107186 | Hypothetical protein. | DoxX-like family protein. | 0.866 |
SHL94782.1 | SHL94823.1 | SAMN05443543_107185 | SAMN05443543_107187 | Hypothetical protein. | Glyoxalase superfamily enzyme, possibly 3-demethylubiquinone-9 3-methyltransferase. | 0.712 |
SHL94782.1 | SHL94844.1 | SAMN05443543_107185 | SAMN05443543_107188 | Hypothetical protein. | PhnB protein. | 0.445 |
SHL94782.1 | SHL94878.1 | SAMN05443543_107185 | SAMN05443543_107190 | Hypothetical protein. | Transcriptional regulator, AraC family with amidase-like domain. | 0.570 |
SHL94806.1 | SHL61304.1 | SAMN05443543_107186 | SAMN05443543_10398 | DoxX-like family protein. | Dihydrofolate reductase. | 0.428 |
SHL94806.1 | SHL62555.1 | SAMN05443543_107186 | SAMN05443543_103159 | DoxX-like family protein. | Transcriptional regulator GlxA family, contains an amidase domain and an AraC-type DNA-binding HTH domain. | 0.568 |
SHL94806.1 | SHL62580.1 | SAMN05443543_107186 | SAMN05443543_103160 | DoxX-like family protein. | Activator of Hsp90 ATPase homolog 1-like protein. | 0.431 |
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