STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHL97301.1Outer membrane transport energization protein ExbD. (130 aa)    
Predicted Functional Partners:
SHL97319.1
Outer membrane transport energization protein ExbB.
 
 0.994
SHL97286.1
Outer membrane transport energization protein TonB.
 
  0.936
exbB
Outer membrane transport energization protein ExbB.
  
 0.888
folC
Dihydrofolate synthase / folylpolyglutamate synthase; Belongs to the folylpolyglutamate synthase family.
     
 0.732
SHL94944.1
Hypothetical protein.
  
  0.697
SHL26626.1
Outer membrane transport energization protein TonB.
   
  0.684
SHL32731.1
TonB protein C-terminal.
   
  0.684
SHL54372.1
TonB protein C-terminal.
   
  0.684
SHL75446.1
TonB protein C-terminal.
   
  0.684
tonB
Outer membrane transport energization protein TonB.
   
  0.684
Your Current Organism:
Flavobacterium flevense
NCBI taxonomy Id: 983
Other names: ATCC 27944, CCUG 14832, CIP 104740, Cytophaga flevensis, F. flevense, IFO 14960, JCM 21143, LMG 8328, LMG:8328, NBRC 14960
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.