STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM05362.1Alkylhydroperoxidase AhpD family core domain-containing protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. (144 aa)    
Predicted Functional Partners:
SHM05385.1
cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases.
 
   
 0.729
SHL38923.1
Transcriptional regulator, TetR family.
 
     0.539
SHM05340.1
Glycosyl hydrolases family 28; Belongs to the glycosyl hydrolase 28 family.
       0.453
hmp
Nitric oxide dioxygenase; Belongs to the globin family.
 
   
 0.429
SHL61581.1
Pimeloyl-ACP methyl ester carboxylesterase.
  
 
  0.425
SHM05411.1
Protein of unknown function.
       0.403
Your Current Organism:
Flavobacterium flevense
NCBI taxonomy Id: 983
Other names: ATCC 27944, CCUG 14832, CIP 104740, Cytophaga flevensis, F. flevense, IFO 14960, JCM 21143, LMG 8328, LMG:8328, NBRC 14960
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