STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM08059.1Acetyltransferase (isoleucine patch superfamily). (192 aa)    
Predicted Functional Partners:
SHL99326.1
Transferase hexapeptide (six repeat-containing protein).
  
     0.774
SHM08109.1
Maltose O-acetyltransferase.
 
    
0.706
SHM08036.1
Membrane protein involved in the export of O-antigen and teichoic acid.
  
    0.632
SHM08084.1
Hypothetical protein.
  
 
  0.626
SHM08130.1
Glycosyl transferases group 1.
  
 
  0.614
SHM08175.1
Glycosyltransferase involved in cell wall bisynthesis.
  
 
  0.566
SHM08155.1
Hypothetical protein.
       0.562
SHL99152.1
Acetyltransferase EpsM.
  
  
  0.560
gmd
GDPmannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
  
    0.510
SHM08216.1
Putative colanic acid biosynthesis acetyltransferase WcaF.
 
    
0.489
Your Current Organism:
Flavobacterium flevense
NCBI taxonomy Id: 983
Other names: ATCC 27944, CCUG 14832, CIP 104740, Cytophaga flevensis, F. flevense, IFO 14960, JCM 21143, LMG 8328, LMG:8328, NBRC 14960
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