STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM12023.1Beta-galactosidase. (694 aa)    
Predicted Functional Partners:
lacZ_1
Beta-galactosidase.
    
  0.771
SHL30960.1
Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family.
    
  0.657
SHL35218.1
Protein of unknown function; Belongs to the glycosyl hydrolase 2 family.
    
  0.657
SHL54343.1
Glycosyl hydrolases family 2, TIM barrel domain; Belongs to the glycosyl hydrolase 2 family.
    
  0.657
SHL71364.1
Alpha-galactosidase.
 
  
  0.649
lacZ_2
Beta-galactosidase.
    
  0.629
lacZ_4
Beta-galactosidase.
    
  0.629
SHM12702.1
Beta-galactosidase.
    
  0.629
SHM17257.1
Ankyrin repeat.
   
 0.606
SHL26010.1
Hypothetical protein.
  
  
  0.545
Your Current Organism:
Flavobacterium flevense
NCBI taxonomy Id: 983
Other names: ATCC 27944, CCUG 14832, CIP 104740, Cytophaga flevensis, F. flevense, IFO 14960, JCM 21143, LMG 8328, LMG:8328, NBRC 14960
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.