STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM14961.1Hypothetical protein. (229 aa)    
Predicted Functional Partners:
SHM14941.1
Carbohydrate binding module (family 6).
 
     0.935
SHL89596.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.645
SHL49381.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.616
SHL98126.1
Hypothetical protein.
  
     0.509
SHM14919.1
Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
    
  0.445
SHL30811.1
Pectinesterase.
    
 0.438
SHL31185.1
Acetyl esterase/lipase.
    
 0.438
SHM00071.1
UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase.
  
     0.434
SHM14981.1
Protein of unknown function.
       0.425
SHL99904.1
Hypothetical protein.
  
     0.409
Your Current Organism:
Flavobacterium flevense
NCBI taxonomy Id: 983
Other names: ATCC 27944, CCUG 14832, CIP 104740, Cytophaga flevensis, F. flevense, IFO 14960, JCM 21143, LMG 8328, LMG:8328, NBRC 14960
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