Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHL30811.1 | SHL31185.1 | SAMN05443543_101255 | SAMN05443543_101273 | Pectinesterase. | Acetyl esterase/lipase. | 0.893 |
SHL30811.1 | SHM14961.1 | SAMN05443543_101255 | SAMN05443543_11412 | Pectinesterase. | Hypothetical protein. | 0.438 |
SHL31185.1 | SHL30811.1 | SAMN05443543_101273 | SAMN05443543_101255 | Acetyl esterase/lipase. | Pectinesterase. | 0.893 |
SHL31185.1 | SHM14961.1 | SAMN05443543_101273 | SAMN05443543_11412 | Acetyl esterase/lipase. | Hypothetical protein. | 0.438 |
SHL49381.1 | SHM14961.1 | SAMN05443543_102238 | SAMN05443543_11412 | Por secretion system C-terminal sorting domain-containing protein. | Hypothetical protein. | 0.616 |
SHL89596.1 | SHM14919.1 | SAMN05443543_106231 | SAMN05443543_11410 | Por secretion system C-terminal sorting domain-containing protein. | Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family. | 0.418 |
SHL89596.1 | SHM14961.1 | SAMN05443543_106231 | SAMN05443543_11412 | Por secretion system C-terminal sorting domain-containing protein. | Hypothetical protein. | 0.645 |
SHL98126.1 | SHM14961.1 | SAMN05443543_10865 | SAMN05443543_11412 | Hypothetical protein. | Hypothetical protein. | 0.509 |
SHL99904.1 | SHM00071.1 | SAMN05443543_108163 | SAMN05443543_108172 | Hypothetical protein. | UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase. | 0.501 |
SHL99904.1 | SHM14961.1 | SAMN05443543_108163 | SAMN05443543_11412 | Hypothetical protein. | Hypothetical protein. | 0.409 |
SHM00071.1 | SHL99904.1 | SAMN05443543_108172 | SAMN05443543_108163 | UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase. | Hypothetical protein. | 0.501 |
SHM00071.1 | SHM14961.1 | SAMN05443543_108172 | SAMN05443543_11412 | UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase. | Hypothetical protein. | 0.434 |
SHM14919.1 | SHL89596.1 | SAMN05443543_11410 | SAMN05443543_106231 | Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family. | Por secretion system C-terminal sorting domain-containing protein. | 0.418 |
SHM14919.1 | SHM14941.1 | SAMN05443543_11410 | SAMN05443543_11411 | Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family. | Carbohydrate binding module (family 6). | 0.552 |
SHM14919.1 | SHM14961.1 | SAMN05443543_11410 | SAMN05443543_11412 | Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family. | Hypothetical protein. | 0.445 |
SHM14941.1 | SHM14919.1 | SAMN05443543_11411 | SAMN05443543_11410 | Carbohydrate binding module (family 6). | Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family. | 0.552 |
SHM14941.1 | SHM14961.1 | SAMN05443543_11411 | SAMN05443543_11412 | Carbohydrate binding module (family 6). | Hypothetical protein. | 0.935 |
SHM14941.1 | SHM14981.1 | SAMN05443543_11411 | SAMN05443543_11413 | Carbohydrate binding module (family 6). | Protein of unknown function. | 0.417 |
SHM14961.1 | SHL30811.1 | SAMN05443543_11412 | SAMN05443543_101255 | Hypothetical protein. | Pectinesterase. | 0.438 |
SHM14961.1 | SHL31185.1 | SAMN05443543_11412 | SAMN05443543_101273 | Hypothetical protein. | Acetyl esterase/lipase. | 0.438 |
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