STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM17306.1Sulfite reductase (NADPH) flavoprotein alpha-component. (726 aa)    
Predicted Functional Partners:
SHL75292.1
Sulfite reductase (ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
 0.992
SHM17257.1
Ankyrin repeat.
 
 
 0.989
SHL61230.1
Rubredoxin.
  
 0.985
paaE
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
   
 0.968
cysH
Phosphoadenylylsulfate reductase (thioredoxin); Reduction of activated sulfate into sulfite.
  
 
 0.965
SHM17285.1
Predicted protein.
 
     0.956
SHL75363.1
5-methyltetrahydrofolate--homocysteine methyltransferase.
  
 0.922
htpG
Molecular chaperone HtpG.
    
 0.917
SHL54420.1
Ferredoxin, 2Fe-2S.
   
 0.909
SHL71988.1
Ferredoxin, 2Fe-2S.
   
 0.909
Your Current Organism:
Flavobacterium flevense
NCBI taxonomy Id: 983
Other names: ATCC 27944, CCUG 14832, CIP 104740, Cytophaga flevensis, F. flevense, IFO 14960, JCM 21143, LMG 8328, LMG:8328, NBRC 14960
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