STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AG1IA_10004HMG (High mobility group) box domain-containing protein. (221 aa)    
Predicted Functional Partners:
AG1IA_00085
Protein disulfide-isomerase.
    
   0.878
AG1IA_03136
Uncharacterized protein.
    
 0.793
AG1IA_00963
Uncharacterized protein.
    
 0.740
AG1IA_07735
HMG (High mobility group) box domain-containing protein.
    
 0.704
AG1IA_08231
Armadillo/beta-catenin/plakoglobin.
    
 0.675
AG1IA_05240
Armadillo/beta-catenin/plakoglobin.
    
 0.675
AG1IA_04321
Uncharacterized protein.
    
 0.675
AG1IA_00997
Ubiquitin-conjugating enzyme 9; Belongs to the ubiquitin-conjugating enzyme family.
    
   0.663
AG1IA_03388
Uncharacterized protein.
    
 0.646
AG1IA_00281
Autophagy-related protein; Vacuolar effluxer which mediate the efflux of amino acids resulting from autophagic degradation. The release of autophagic amino acids allows the maintenance of protein synthesis and viability during nitrogen starvation; Belongs to the ATG22 family.
    
   0.614
Your Current Organism:
Rhizoctonia solani AG1IA
NCBI taxonomy Id: 983506
Other names: R. solani AG-1 IA, Rhizoctonia solani AG-1 IA, Rhizoctonia solani AG-1IA, Rhizoctonia solani AG-1IA SC, Rhizoctonia solani AG1 IA, Rhizoctonia solani AG1 IA SC, Rhizoctonia solani AG1-IA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.