STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AG1IA_08974Uncharacterized protein. (753 aa)    
Predicted Functional Partners:
AG1IA_00716
RNA recognition motif domain-containing protein.
   
  0.809
AG1IA_04383
Rare lipoprotein A (RlpA)-like double-psi beta-barrel domain-containing protein.
   
  0.779
AG1IA_02466
Splicing factor 3B subunit 1.
   
 
 0.752
AG1IA_01700
Pre-mRNA processing splicing factor 8.
    
 
 0.717
AG1IA_00302
Uncharacterized protein.
   
  0.710
AG1IA_03999
Pinin/SDK/memA conserved region domain-containing protein.
   
  0.706
AG1IA_05723
U5 snRNP component protein.
    
 
 0.697
AG1IA_04310
SR-rich pre-mRNA splicing activator.
   
 
 0.687
AG1IA_04320
U4/U6 small nuclear ribonucleoprotein Prp31.
    
 
 0.677
AG1IA_08662
SART-1 domain-containing protein.
   
   0.663
Your Current Organism:
Rhizoctonia solani AG1IA
NCBI taxonomy Id: 983506
Other names: R. solani AG-1 IA, Rhizoctonia solani AG-1 IA, Rhizoctonia solani AG-1IA, Rhizoctonia solani AG-1IA SC, Rhizoctonia solani AG1 IA, Rhizoctonia solani AG1 IA SC, Rhizoctonia solani AG1-IA
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.