STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AG1IA_09947Uncharacterized protein. (247 aa)    
Predicted Functional Partners:
AG1IA_04636
TAFII28 domain-containing protein.
   
 0.971
AG1IA_02354
Transcription initiation factor TFIID 23-30kDa subunit domain-containing protein.
    
 0.970
AG1IA_07698
Transcription initiation factor TFIID complex 60 kDa subunit.
    
 0.969
AG1IA_05679
Transcription initiation factor TFIID subunit 2.
    
 0.962
AG1IA_01328
Transcription initiation factor tfiid 55 kDa subunit.
    
 0.957
AG1IA_00514
TFIID-31kDa domain-containing protein.
    
 0.931
AG1IA_10163
WD40 domain-containing protein.
    
 0.930
AG1IA_01438
TFIID and SAGA subunit.
    
 0.930
AG1IA_04607
Atypical/TAF1 protein kinase.
    
 0.928
AG1IA_04606
Uncharacterized protein.
    
 0.928
Your Current Organism:
Rhizoctonia solani AG1IA
NCBI taxonomy Id: 983506
Other names: R. solani AG-1 IA, Rhizoctonia solani AG-1 IA, Rhizoctonia solani AG-1IA, Rhizoctonia solani AG-1IA SC, Rhizoctonia solani AG1 IA, Rhizoctonia solani AG1 IA SC, Rhizoctonia solani AG1-IA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.