AG1IA_09908 protein (Rhizoctonia solani AG1IA)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Cooccurrence

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[Homology]

Score

AG1IA_09908

Uncharacterized protein. (243 aa)

Predicted Functional Partners:

AG1IA_09499

0.996

AG1IA_05628

0.984

AG1IA_04128

0.977

AG1IA_04849

0.970

AG1IA_00224

0.957

AG1IA_00142

0.955

AG1IA_04990

0.953

AG1IA_04978

0.953

AG1IA_00958

0.952

AG1IA_06603

0.943

Your Current Organism:

Rhizoctonia solani AG1IA

NCBI taxonomy Id: 983506
Other names: R. solani AG-1 IA, Rhizoctonia solani AG-1 IA, Rhizoctonia solani AG-1IA, Rhizoctonia solani AG-1IA SC, Rhizoctonia solani AG1 IA, Rhizoctonia solani AG1 IA SC, Rhizoctonia solani AG1-IA

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AG1IA_00142	AG1IA_00224	L8X6B8	L8X9K4	PUB domain-containing protein.	Phospholipase A-2-activating protein.	0.621
AG1IA_00142	AG1IA_00958	L8X6B8	L8X7H1	PUB domain-containing protein.	OTU domain-containing protein.	0.564
AG1IA_00142	AG1IA_04128	L8X6B8	L8WYI9	PUB domain-containing protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.852
AG1IA_00142	AG1IA_04849	L8X6B8	L8WSL6	PUB domain-containing protein.	UBX domain-containing protein.	0.940
AG1IA_00142	AG1IA_04978	L8X6B8	L8WS84	PUB domain-containing protein.	AAA family ATPase.	0.852
AG1IA_00142	AG1IA_04990	L8X6B8	L8WS74	PUB domain-containing protein.	AAA family ATPase, putative.	0.852
AG1IA_00142	AG1IA_09499	L8X6B8	L8WIB7	PUB domain-containing protein.	Cell division cycle protein 48; Belongs to the AAA ATPase family.	0.852
AG1IA_00142	AG1IA_09908	L8X6B8	L8WH54	PUB domain-containing protein.	Uncharacterized protein.	0.955
AG1IA_00224	AG1IA_00142	L8X9K4	L8X6B8	Phospholipase A-2-activating protein.	PUB domain-containing protein.	0.621
AG1IA_00224	AG1IA_00958	L8X9K4	L8X7H1	Phospholipase A-2-activating protein.	OTU domain-containing protein.	0.957
AG1IA_00224	AG1IA_04128	L8X9K4	L8WYI9	Phospholipase A-2-activating protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.913
AG1IA_00224	AG1IA_04849	L8X9K4	L8WSL6	Phospholipase A-2-activating protein.	UBX domain-containing protein.	0.947
AG1IA_00224	AG1IA_04978	L8X9K4	L8WS84	Phospholipase A-2-activating protein.	AAA family ATPase.	0.855
AG1IA_00224	AG1IA_04990	L8X9K4	L8WS74	Phospholipase A-2-activating protein.	AAA family ATPase, putative.	0.855
AG1IA_00224	AG1IA_05628	L8X9K4	L8WUD6	Phospholipase A-2-activating protein.	MBF1 domain-containing protein.	0.621
AG1IA_00224	AG1IA_06603	L8X9K4	L8WN39	Phospholipase A-2-activating protein.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.424
AG1IA_00224	AG1IA_09499	L8X9K4	L8WIB7	Phospholipase A-2-activating protein.	Cell division cycle protein 48; Belongs to the AAA ATPase family.	0.958
AG1IA_00224	AG1IA_09908	L8X9K4	L8WH54	Phospholipase A-2-activating protein.	Uncharacterized protein.	0.957
AG1IA_00958	AG1IA_00142	L8X7H1	L8X6B8	OTU domain-containing protein.	PUB domain-containing protein.	0.564
AG1IA_00958	AG1IA_00224	L8X7H1	L8X9K4	OTU domain-containing protein.	Phospholipase A-2-activating protein.	0.957

page 1 of 5

Network Stats

number of nodes:

11

number of edges:

55

average node degree:

10

avg. local clustering coefficient:

1

expected number of edges:

13

PPI enrichment p-value:

< 1.0e-16

your network has significantly more interactions
than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Biological Process (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0071973

Bacterial-type flagellum-dependent cell motility

7 of 17

1.92

3.59

2.24e-09

GO:0044781

Bacterial-type flagellum organization

3 of 12

1.7

1.02

0.0082

Molecular Function (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0003774

Cytoskeletal motor activity

4 of 7

2.06

2.12

5.53e-05

Cellular Component (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0009425

Bacterial-type flagellum basal body

8 of 18

1.95

4.55

2.08e-12

GO:0030694

Bacterial-type flagellum basal body, rod

4 of 7

2.06

2.73

2.06e-06

GO:0009426

Bacterial-type flagellum basal body, distal rod

2 of 2

2.3

1.42

0.0022

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:2052

Flagellar assembly

11 of 31

1.85

5.28

1.47e-17

CL:2057

Bacterial-type flagellum basal body, and Bacterial flagellum protein export

7 of 14

2.0

4.36

3.18e-11

CL:2104

Bacterial-type flagellum basal body, rod

4 of 5

2.2

2.91

1.42e-06

CL:2060

Bacterial-type flagellum-dependent cell motility

3 of 5

2.08

1.92

0.00016

CL:2075

Bacterial flagellum protein export, and Bacterial-type flagellum assembly

2 of 5

1.9

0.96

0.0141

KEGG Pathways

pathway

description

count in network

strength

signal

false discovery rate

map02040

Flagellar assembly

11 of 33

1.82

5.21

5.47e-18

Subcellular Localization (COMPARTMENTS)

compartment

description

count in network

strength

signal

false discovery rate

GOCC:0009425

Bacterial-type flagellum basal body

9 of 16

2.05

5.7

2.84e-15

GOCC:0009288

Bacterial-type flagellum

10 of 29

1.84

4.83

1.89e-15

GOCC:0009426

Bacterial-type flagellum basal body, distal rod

2 of 2

2.3

1.26

0.0046

Annotated Keywords (UniProt)

keyword

description

count in network

strength

signal

false discovery rate

KW-0282

Flagellum

11 of 32

1.84

5.26

7.05e-18

KW-0975

Bacterial flagellum

5 of 12

1.92

2.9

2.91e-07

KW-1006

Bacterial flagellum protein export

2 of 3

2.12

1.11

0.0081

KW-1005

Bacterial flagellum biogenesis

2 of 5

1.9

0.96

0.0142

KW-0732

Signal

3 of 47

1.11

0.57

0.0413

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