AG1IA_09487 protein (Rhizoctonia solani AG1IA)

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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Coexpression

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Score

AG1IA_09487

Pectate lyase domain-containing protein. (946 aa)

Predicted Functional Partners:

AG1IA_01867

0.682

AG1IA_06960

0.662

AG1IA_07141

0.662

AG1IA_02694

0.662

AG1IA_02031

0.662

AG1IA_02257

0.662

AG1IA_03954

0.641

AG1IA_02705

0.641

AG1IA_05437

0.624

AG1IA_09536

0.576

Your Current Organism:

Rhizoctonia solani AG1IA

NCBI taxonomy Id: 983506
Other names: R. solani AG-1 IA, Rhizoctonia solani AG-1 IA, Rhizoctonia solani AG-1IA, Rhizoctonia solani AG-1IA SC, Rhizoctonia solani AG1 IA, Rhizoctonia solani AG1 IA SC, Rhizoctonia solani AG1-IA

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AG1IA_01867	AG1IA_02031	L8X4R2	L8X134	Ubiquitin.	Uncharacterized protein.	0.521
AG1IA_01867	AG1IA_02257	L8X4R2	L8X3V3	Ubiquitin.	SAGA-Tad1 domain-containing protein.	0.629
AG1IA_01867	AG1IA_02694	L8X4R2	L8WYZ2	Ubiquitin.	Uncharacterized protein.	0.629
AG1IA_01867	AG1IA_02705	L8X4R2	L8X2F4	Ubiquitin.	Ubiquitin domain-containing protein.	0.970
AG1IA_01867	AG1IA_03954	L8X4R2	L8WVI0	Ubiquitin.	Polyubiquitin.	0.970
AG1IA_01867	AG1IA_06960	L8X4R2	L8WQF8	Ubiquitin.	mRNA capping enzyme, beta chain domain-containing protein.	0.521
AG1IA_01867	AG1IA_07141	L8X4R2	L8WR60	Ubiquitin.	Pkinase domain-containing protein.	0.521
AG1IA_01867	AG1IA_09487	L8X4R2	L8WI57	Ubiquitin.	Pectate lyase domain-containing protein.	0.682
AG1IA_01867	AG1IA_09536	L8X4R2	L8WEQ3	Ubiquitin.	Efhand domain-containing protein; Belongs to the calmodulin family.	0.665
AG1IA_02031	AG1IA_01867	L8X134	L8X4R2	Uncharacterized protein.	Ubiquitin.	0.521
AG1IA_02031	AG1IA_02705	L8X134	L8X2F4	Uncharacterized protein.	Ubiquitin domain-containing protein.	0.472
AG1IA_02031	AG1IA_03954	L8X134	L8WVI0	Uncharacterized protein.	Polyubiquitin.	0.472
AG1IA_02031	AG1IA_09487	L8X134	L8WI57	Uncharacterized protein.	Pectate lyase domain-containing protein.	0.662
AG1IA_02257	AG1IA_01867	L8X3V3	L8X4R2	SAGA-Tad1 domain-containing protein.	Ubiquitin.	0.629
AG1IA_02257	AG1IA_02705	L8X3V3	L8X2F4	SAGA-Tad1 domain-containing protein.	Ubiquitin domain-containing protein.	0.472
AG1IA_02257	AG1IA_03954	L8X3V3	L8WVI0	SAGA-Tad1 domain-containing protein.	Polyubiquitin.	0.472
AG1IA_02257	AG1IA_09487	L8X3V3	L8WI57	SAGA-Tad1 domain-containing protein.	Pectate lyase domain-containing protein.	0.662
AG1IA_02694	AG1IA_01867	L8WYZ2	L8X4R2	Uncharacterized protein.	Ubiquitin.	0.629
AG1IA_02694	AG1IA_02705	L8WYZ2	L8X2F4	Uncharacterized protein.	Ubiquitin domain-containing protein.	0.472
AG1IA_02694	AG1IA_03954	L8WYZ2	L8WVI0	Uncharacterized protein.	Polyubiquitin.	0.472

page 1 of 4

Network Stats

number of nodes:

11

number of edges:

50

average node degree:

9.09

avg. local clustering coefficient:

0.931

expected number of edges:

12

PPI enrichment p-value:

3.33e-16

your network has significantly more interactions
than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Biological Process (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0071941

Nitrogen cycle metabolic process

3 of 13

1.85

0.91

0.0177

Molecular Function (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0051536

Iron-sulfur cluster binding

5 of 70

1.34

1.13

0.0013

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:2489

Multiheme cytochrome superfamily, and Nitrate assimilation

5 of 5

2.49

4.1

1.10e-08

CL:2462

Mixed, incl. Electron transport, and Immunoglobulin-like fold

6 of 19

1.99

3.51

1.10e-08

CL:2362

Mixed, incl. Oxidative phosphorylation, and Heme binding

8 of 69

1.55

2.63

5.34e-09

CL:2852

Mixed, incl. BFD-like [2Fe-2S]-binding domain, and Alkanesulfonate transport

3 of 6

2.19

1.87

0.00025

KEGG Pathways

pathway

description

count in network

strength

signal

false discovery rate

map00910

Nitrogen metabolism

3 of 31

1.48

0.81

0.0184

map01120

Microbial metabolism in diverse environments

6 of 341

0.74

0.47

0.0204

Annotated Keywords (UniProt)

keyword

description

count in network

strength

signal

false discovery rate

KW-0249

Electron transport

3 of 15

1.79

1.31

0.0021

KW-0534

Nitrate assimilation

2 of 2

2.49

1.31

0.0040

KW-0408

Iron

5 of 68

1.36

1.29

0.00034

KW-0574

Periplasm

2 of 7

1.95

1.04

0.0101

KW-0500

Molybdenum

2 of 7

1.95

1.04

0.0101

(more ...)

Protein Domains (Pfam)

domain

description

count in network

strength

signal

false discovery rate

PF01568

Molydopterin dinucleotide binding domain

2 of 2

2.49

0.84

0.0298

PF04324

BFD-like [2Fe-2S] binding domain

2 of 3

2.31

0.83

0.0298

PF00384

Molybdopterin oxidoreductase

2 of 3

2.31

0.83

0.0298

Protein Domains (SMART)

domain

description

count in network

strength

signal

false discovery rate

SM00926

Molybdopterin oxidoreductase Fe4S4 domain

2 of 2

2.49

1.23

0.0055

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