STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AG1IA_08183Glutamine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. (560 aa)    
Predicted Functional Partners:
AG1IA_10086
Proline-tRNA ligase.
 
 0.992
AG1IA_08998
Multisynthetase complex auxiliary component p43.
 
 0.989
AG1IA_07509
Isoleucyl-tRNA synthetase.
  
 0.988
AG1IA_01618
Proline-tRNA ligase.
 
 0.987
AG1IA_02426
Ribosomal l7Ae/L30e/S12e/Gadd45 family domain-containing protein.
   
 0.986
AG1IA_10389
Ribosomal l21e domain-containing protein.
   
 0.985
AG1IA_01267
Glutamate-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
0.985
AG1IA_03601
Ribosomal l38e domain-containing protein; Belongs to the eukaryotic ribosomal protein eL38 family.
   
 0.984
AG1IA_00593
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
 0.984
AG1IA_09470
Tyrosyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.983
Your Current Organism:
Rhizoctonia solani AG1IA
NCBI taxonomy Id: 983506
Other names: R. solani AG-1 IA, Rhizoctonia solani AG-1 IA, Rhizoctonia solani AG-1IA, Rhizoctonia solani AG-1IA SC, Rhizoctonia solani AG1 IA, Rhizoctonia solani AG1 IA SC, Rhizoctonia solani AG1-IA
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