STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AG1IA_07318Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family. (441 aa)    
Predicted Functional Partners:
AG1IA_09208
U3 snoRNP protein Utp20.
   
 0.820
AG1IA_00416
Utp12 domain-containing protein.
   
 0.810
AG1IA_09413
Nitrate reductase.
    
 0.808
AG1IA_00368
KDa Trp-Asp repeats containing protein.
   
 0.801
AG1IA_01474
Uncharacterized protein.
    
 0.795
AG1IA_04317
40S ribosomal protein S6.
   
  0.793
AG1IA_04149
Cyclin-dependent protein kinase inhibitor.
    
 0.791
AG1IA_06444
WD40 domain-containing protein.
    
  0.789
AG1IA_02766
Ribosome biogenesis protein Noc4.
    
  0.789
AG1IA_00360
WD repeat-containing protein 46.
    
  0.788
Your Current Organism:
Rhizoctonia solani AG1IA
NCBI taxonomy Id: 983506
Other names: R. solani AG-1 IA, Rhizoctonia solani AG-1 IA, Rhizoctonia solani AG-1IA, Rhizoctonia solani AG-1IA SC, Rhizoctonia solani AG1 IA, Rhizoctonia solani AG1 IA SC, Rhizoctonia solani AG1-IA
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