STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AG1IA_07505Diphosphomevalonate decarboxylase; Belongs to the diphosphomevalonate decarboxylase family. (400 aa)    
Predicted Functional Partners:
AG1IA_08628
Isoprenoid biosynthesis-related protein; Belongs to the FPP/GGPP synthase family.
  
 0.947
AG1IA_04251
Isopentenyl-diphosphate Delta-isomerase.
  
 
 0.929
AG1IA_04785
Decaprenyl-diphosphate synthase subunit 1; Belongs to the FPP/GGPP synthase family.
  
 0.917
AG1IA_01623
3-hydroxy-3-methylglutaryl coenzyme A reductase.
  
 
 0.896
AG1IA_04556
L-mandelate dehydrogenase.
  
 
 0.890
AG1IA_03897
Cytochrome b2; Belongs to the cytochrome b5 family.
  
 
 0.890
AG1IA_00271
Cytochrome b2 (L-lactate ferricytochrome C oxidoreductase).
  
 
 0.890
AG1IA_04130
PaRep2b domain-containing protein.
   
 0.888
AG1IA_03467
Phosphomevalonate kinase; Belongs to the GHMP kinase family. Mevalonate kinase subfamily.
  
 
 0.886
AG1IA_10390
Polyprenyl synthetase domain-containing protein.
  
 0.872
Your Current Organism:
Rhizoctonia solani AG1IA
NCBI taxonomy Id: 983506
Other names: R. solani AG-1 IA, Rhizoctonia solani AG-1 IA, Rhizoctonia solani AG-1IA, Rhizoctonia solani AG-1IA SC, Rhizoctonia solani AG1 IA, Rhizoctonia solani AG1 IA SC, Rhizoctonia solani AG1-IA
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