STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AG1IA_07445Uncharacterized protein. (612 aa)    
Predicted Functional Partners:
AG1IA_02408
DNA polymerase.
   
 0.994
AG1IA_07809
DNA primase; Belongs to the eukaryotic-type primase small subunit family.
   
 0.988
AG1IA_02344
DNA polymerase.
   
 0.971
AG1IA_09485
DNA helicase; Belongs to the MCM family.
   
 0.925
AG1IA_05469
Replication factor C subunit 4.
   
 0.924
AG1IA_01308
OB-fold nucleic acid binding domain-containing protein.
   
 0.910
AG1IA_01868
DNA replication factor.
   
 0.904
AG1IA_01231
Replication factor C.
   
 0.901
AG1IA_00297
Replication factor C subunit 1.
   
 0.900
AG1IA_04724
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 
 0.883
Your Current Organism:
Rhizoctonia solani AG1IA
NCBI taxonomy Id: 983506
Other names: R. solani AG-1 IA, Rhizoctonia solani AG-1 IA, Rhizoctonia solani AG-1IA, Rhizoctonia solani AG-1IA SC, Rhizoctonia solani AG1 IA, Rhizoctonia solani AG1 IA SC, Rhizoctonia solani AG1-IA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.