STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AG1IA_08286Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (219 aa)    
Predicted Functional Partners:
AG1IA_09313
Glutathione transferase omega-1.
    
 0.999
AG1IA_06503
TRAPPC10 domain-containing protein.
    
 0.999
AG1IA_05169
TRAPP domain-containing protein.
   
 0.999
AG1IA_04558
Uncharacterized protein.
   
 0.999
AG1IA_04515
TRAPP domain-containing protein.
   
 0.999
AG1IA_04409
TRAPPC-Trs85 domain-containing protein.
    
 0.999
AG1IA_02813
Uncharacterized protein.
   
 0.999
AG1IA_01255
TRAPP domain-containing protein.
   
 0.999
AG1IA_00975
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
   
 0.999
AG1IA_01692
Uncharacterized protein.
    
 0.997
Your Current Organism:
Rhizoctonia solani AG1IA
NCBI taxonomy Id: 983506
Other names: R. solani AG-1 IA, Rhizoctonia solani AG-1 IA, Rhizoctonia solani AG-1IA, Rhizoctonia solani AG-1IA SC, Rhizoctonia solani AG1 IA, Rhizoctonia solani AG1 IA SC, Rhizoctonia solani AG1-IA
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.