STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AG1IA_08505Uncharacterized protein. (256 aa)    
Predicted Functional Partners:
AG1IA_04527
UDP-N-acetylglucosaminyltransferase.
   
 
 0.715
AG1IA_02126
50S ribosomal protein L3.
    
  0.647
AG1IA_04177
Ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family.
   
  0.608
AG1IA_04176
Uncharacterized protein.
   
  0.608
AG1IA_01251
FliC domain-containing protein.
    
 0.603
AG1IA_06833
Ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family.
    
  0.598
AG1IA_04285
60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
    
  0.565
AG1IA_04287
Uncharacterized protein.
    
  0.565
AG1IA_04286
Uncharacterized protein.
    
  0.565
AG1IA_05674
Uncharacterized protein.
    
 
 0.448
Your Current Organism:
Rhizoctonia solani AG1IA
NCBI taxonomy Id: 983506
Other names: R. solani AG-1 IA, Rhizoctonia solani AG-1 IA, Rhizoctonia solani AG-1IA, Rhizoctonia solani AG-1IA SC, Rhizoctonia solani AG1 IA, Rhizoctonia solani AG1 IA SC, Rhizoctonia solani AG1-IA
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