STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AG1IA_07845Carboxypeptidase A1. (238 aa)    
Predicted Functional Partners:
AG1IA_07844
Carboxypeptidase activation peptide domain-containing protein.
 
     0.923
AG1IA_09413
Nitrate reductase.
    
 0.844
AG1IA_06840
Uncharacterized protein.
    
 0.618
AG1IA_07047
Uncharacterized protein.
    
 0.618
AG1IA_07709
Modifier of rudimentary (Mod(R)) domain-containing protein.
    
 0.609
AG1IA_02442
Uncharacterized protein.
    
  0.541
AG1IA_07745
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
    
  0.478
AG1IA_04453
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
    
  0.468
AG1IA_01527
NDK domain-containing protein.
   
  0.455
AG1IA_00377
Nucleoside diphosphate kinase; Belongs to the NDK family.
   
  0.455
Your Current Organism:
Rhizoctonia solani AG1IA
NCBI taxonomy Id: 983506
Other names: R. solani AG-1 IA, Rhizoctonia solani AG-1 IA, Rhizoctonia solani AG-1IA, Rhizoctonia solani AG-1IA SC, Rhizoctonia solani AG1 IA, Rhizoctonia solani AG1 IA SC, Rhizoctonia solani AG1-IA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.