STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AG1IA_08006Glycoside hydrolase family 30 protein. (866 aa)    
Predicted Functional Partners:
AG1IA_06347
Pyridoxamine-phosphate oxidase.
    
 0.871
AG1IA_03262
Glutamine amidotransferase subunit pdxT.
    
 0.868
AG1IA_01995
NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX.
     
 0.851
AG1IA_04977
Vitamin B6 biosynthesis protein; Belongs to the PdxS/SNZ family.
   
 0.832
AG1IA_02181
Thiamin biosynthesis protein.
   
 
 0.830
AG1IA_07340
4-nitrophenylphosphatase.
    
 0.829
AG1IA_05677
Pyridoxamine 5'-phosphate oxidase domain-containing protein.
     
 0.799
AG1IA_04084
Glycosyltransferase family 32 protein.
    
 0.761
AG1IA_08791
Skp1 domain-containing protein; Belongs to the SKP1 family.
    
 
 0.682
AG1IA_06514
Skp1 domain-containing protein; Belongs to the SKP1 family.
    
 
 0.682
Your Current Organism:
Rhizoctonia solani AG1IA
NCBI taxonomy Id: 983506
Other names: R. solani AG-1 IA, Rhizoctonia solani AG-1 IA, Rhizoctonia solani AG-1IA, Rhizoctonia solani AG-1IA SC, Rhizoctonia solani AG1 IA, Rhizoctonia solani AG1 IA SC, Rhizoctonia solani AG1-IA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.