STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AG1IA_06113ATP-binding cassette transporter YOR1. (156 aa)    
Predicted Functional Partners:
AG1IA_04092
ATP-dependent bile acid transporter.
 
     0.917
AG1IA_06114
Canalicular multispecific organic anion transporter 1.
 
      0.900
AG1IA_05371
Metal resistance protein YCF1.
 
   
  0.900
AG1IA_01102
ATP-binding cassette transporter.
 
      0.900
AG1IA_01101
ATP-binding cassette transporter.
 
      0.900
AG1IA_01086
Multidrug resistance-associated ABC transporter.
 
      0.900
AG1IA_06082
Multidrug resistance-associated ABC transporter.
 
      0.899
AG1IA_01111
ATP-binding cassette transporter.
 
      0.870
AG1IA_09547
Multidrug resistance-associated ABC transporter.
 
      0.816
AG1IA_01104
ATP-binding cassette transporter.
 
     0.808
Your Current Organism:
Rhizoctonia solani AG1IA
NCBI taxonomy Id: 983506
Other names: R. solani AG-1 IA, Rhizoctonia solani AG-1 IA, Rhizoctonia solani AG-1IA, Rhizoctonia solani AG-1IA SC, Rhizoctonia solani AG1 IA, Rhizoctonia solani AG1 IA SC, Rhizoctonia solani AG1-IA
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