STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AG1IA_06183SNARE domain-containing protein. (198 aa)    
Predicted Functional Partners:
AG1IA_05730
Vesicle transport v-snare protein vti1.
   
 0.999
AG1IA_07707
SNARE domain-containing protein; Belongs to the syntaxin family.
    
 0.988
AG1IA_04131
Vesicular-fusion protein SEC17.
    
 0.988
AG1IA_06233
Synaptobrevin domain-containing protein.
    
 0.987
AG1IA_03482
Syntaxin domain-containing protein.
    
 0.970
AG1IA_03483
SNARE domain-containing protein; Belongs to the syntaxin family.
    
 0.970
AG1IA_00371
Protein transport protein Sec22; Belongs to the synaptobrevin family.
    
 0.958
AG1IA_05407
SNARE protein SED5/Syntaxin 5.
    
 0.954
AG1IA_00007
Vesicular-fusion protein SEC18.
    
 0.952
AG1IA_04407
DigA protein.
    
 
 0.937
Your Current Organism:
Rhizoctonia solani AG1IA
NCBI taxonomy Id: 983506
Other names: R. solani AG-1 IA, Rhizoctonia solani AG-1 IA, Rhizoctonia solani AG-1IA, Rhizoctonia solani AG-1IA SC, Rhizoctonia solani AG1 IA, Rhizoctonia solani AG1 IA SC, Rhizoctonia solani AG1-IA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.