STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AG1IA_07269Structural constituent of nuclear pore. (1994 aa)    
Predicted Functional Partners:
AG1IA_04495
Nucleoporin-interacting protein NIC96.
   
 0.999
AG1IA_08159
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 0.996
AG1IA_03042
Uncharacterized protein.
   
 0.996
AG1IA_00181
Nsp1_C domain-containing protein.
   
 0.996
AG1IA_04717
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.992
AG1IA_05249
Uncharacterized protein.
   
 0.990
AG1IA_09143
Nuclear pore protein seh1; Belongs to the WD repeat SEC13 family.
   
 0.989
AG1IA_08320
Protein transporter SEC13; Belongs to the WD repeat SEC13 family.
    
 0.987
AG1IA_00091
Tetratricopeptide repeat domain-containing protein.
   
 0.986
AG1IA_00090
Nup160 domain-containing protein.
   
 0.986
Your Current Organism:
Rhizoctonia solani AG1IA
NCBI taxonomy Id: 983506
Other names: R. solani AG-1 IA, Rhizoctonia solani AG-1 IA, Rhizoctonia solani AG-1IA, Rhizoctonia solani AG-1IA SC, Rhizoctonia solani AG1 IA, Rhizoctonia solani AG1 IA SC, Rhizoctonia solani AG1-IA
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.