STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AG1IA_05663RibD_C domain-containing protein. (261 aa)    
Predicted Functional Partners:
AG1IA_02366
GTP cyclohydrolase II.
 
  
 0.830
AG1IA_05807
Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP.
  
 0.816
AG1IA_02833
Adenine phosphoribosyltransferase.
  
 0.812
AG1IA_02883
Ribulose-phosphate 3 epimerase family domain-containing protein.
  
 0.809
AG1IA_08014
Extracellular invertase; Belongs to the glycosyl hydrolase 32 family.
  
 
 0.793
AG1IA_02400
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.789
AG1IA_04861
Ribose 5-phosphate isomerase A (Phosphoriboisomerase a) domain-containing protein.
    
 0.778
AG1IA_00745
Deoxyribose-phosphate aldolase.
    
 0.775
AG1IA_06269
Mannose-6-phosphate isomerase.
    
 0.772
AG1IA_04820
Myo inositol monophosphatase.
  
 
 0.772
Your Current Organism:
Rhizoctonia solani AG1IA
NCBI taxonomy Id: 983506
Other names: R. solani AG-1 IA, Rhizoctonia solani AG-1 IA, Rhizoctonia solani AG-1IA, Rhizoctonia solani AG-1IA SC, Rhizoctonia solani AG1 IA, Rhizoctonia solani AG1 IA SC, Rhizoctonia solani AG1-IA
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