STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AG1IA_05604RNase3 domain-containing protein. (157 aa)    
Predicted Functional Partners:
AG1IA_02669
ATP-dependent RNA helicase DBP3; Belongs to the DEAD box helicase family.
   
 0.871
AG1IA_00927
Ribosomal l27 domain-containing protein.
  
 
 0.871
AG1IA_03457
Ribosomal s9/S16 domain-containing protein; Belongs to the universal ribosomal protein uS9 family.
   
 
 0.862
AG1IA_08233
Argonaute-like protein.
    
 0.846
AG1IA_06467
Piwi domain-containing protein.
    
 0.846
AG1IA_04679
Argonaute-like protein; Belongs to the argonaute family.
    
 0.846
AG1IA_00145
Piwi domain-containing protein.
    
 0.846
AG1IA_08080
Ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.844
AG1IA_02801
Ribosomal l19 domain-containing protein.
  
 
 0.844
AG1IA_04277
Ribosomal l32p domain-containing protein.
  
   0.842
Your Current Organism:
Rhizoctonia solani AG1IA
NCBI taxonomy Id: 983506
Other names: R. solani AG-1 IA, Rhizoctonia solani AG-1 IA, Rhizoctonia solani AG-1IA, Rhizoctonia solani AG-1IA SC, Rhizoctonia solani AG1 IA, Rhizoctonia solani AG1 IA SC, Rhizoctonia solani AG1-IA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.