STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AG1IA_05540Short-chain dehydrogenase. (295 aa)    
Predicted Functional Partners:
AG1IA_02876
Dihydrofolate reductase domain-containing protein; Belongs to the dihydrofolate reductase family.
   
 
 0.677
AG1IA_04155
Electron transfer protein 1.
   
 0.669
AG1IA_08515
Fer2 domain-containing protein.
   
 0.642
AG1IA_00740
Short chain dehydrogenase domain-containing protein.
  
 
 0.626
AG1IA_03302
Short chain dehydrogenase domain-containing protein.
  
 
 0.609
AG1IA_07564
Delta 9-fatty acid desaturase protein.
   
 0.601
AG1IA_01090
Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.
   
 0.601
AG1IA_03443
Peroxisomal targeting signal 1 receptor.
    
 0.600
AG1IA_04780
Peroxisome targeting signal receptor.
    
 0.600
AG1IA_08833
Short chain dehydrogenase domain-containing protein.
  
 
 0.599
Your Current Organism:
Rhizoctonia solani AG1IA
NCBI taxonomy Id: 983506
Other names: R. solani AG-1 IA, Rhizoctonia solani AG-1 IA, Rhizoctonia solani AG-1IA, Rhizoctonia solani AG-1IA SC, Rhizoctonia solani AG1 IA, Rhizoctonia solani AG1 IA SC, Rhizoctonia solani AG1-IA
Server load: low (20%) [HD]