STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AG1IA_06683Carboxypeptidase s. (421 aa)    
Predicted Functional Partners:
AG1IA_06715
Arg-6 protein; In the N-terminal section; belongs to the acetylglutamate kinase family.
  
 0.939
AG1IA_02434
Argininosuccinate synthetase.
  
 0.806
AG1IA_00251
His4p.
    
 0.796
AG1IA_08952
Allantoinase.
  
 
 0.700
AG1IA_02456
Amidohydrolase family domain-containing protein.
  
 
 0.700
AG1IA_09661
Dihydroorotate dehydrogenase.
  
 0.694
AG1IA_04157
Dihydroorotate oxidase.
  
 0.694
AG1IA_05616
Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
    
 0.687
AG1IA_04622
Ornithine carbamoyltransferase.
    
 0.677
AG1IA_04807
Aminotransferase class-III domain-containing protein.
  
 0.673
Your Current Organism:
Rhizoctonia solani AG1IA
NCBI taxonomy Id: 983506
Other names: R. solani AG-1 IA, Rhizoctonia solani AG-1 IA, Rhizoctonia solani AG-1IA, Rhizoctonia solani AG-1IA SC, Rhizoctonia solani AG1 IA, Rhizoctonia solani AG1 IA SC, Rhizoctonia solani AG1-IA
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