STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AG1IA_06190Uncharacterized protein. (193 aa)    
Predicted Functional Partners:
AG1IA_04149
Cyclin-dependent protein kinase inhibitor.
    
 0.810
AG1IA_01867
Ubiquitin.
    
  0.781
AG1IA_06192
Serine/threonine-protein phosphatase.
    
 0.780
AG1IA_00997
Ubiquitin-conjugating enzyme 9; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.753
AG1IA_09079
Ras domain-containing protein.
    
 0.748
AG1IA_05507
Ras domain-containing protein.
    
 0.748
AG1IA_07680
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
    
 0.745
AG1IA_09078
Skp1 family, tetramerisation domain-containing protein; Belongs to the SKP1 family.
    
 0.744
AG1IA_08587
Multicopper oxidase domain-containing protein.
    
 0.738
AG1IA_05948
Serglycin domain-containing protein.
    
 0.738
Your Current Organism:
Rhizoctonia solani AG1IA
NCBI taxonomy Id: 983506
Other names: R. solani AG-1 IA, Rhizoctonia solani AG-1 IA, Rhizoctonia solani AG-1IA, Rhizoctonia solani AG-1IA SC, Rhizoctonia solani AG1 IA, Rhizoctonia solani AG1 IA SC, Rhizoctonia solani AG1-IA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.