STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AG1IA_06454GDP-L-fucose synthetase. (329 aa)    
Predicted Functional Partners:
AG1IA_03129
GDP-mannose 4,6-dehydratase.
 
 0.975
AG1IA_04518
Ribosomal s14p/S29e domain-containing protein.
   
 0.889
AG1IA_02452
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
  0.889
AG1IA_02873
40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
   
 0.880
AG1IA_07680
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 0.879
AG1IA_07539
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
  0.877
AG1IA_04289
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
  0.876
AG1IA_05108
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
  0.872
AG1IA_05851
Plectin/S10 domain-containing protein.
   
 0.871
AG1IA_04555
Sugar transporter.
   
 0.868
Your Current Organism:
Rhizoctonia solani AG1IA
NCBI taxonomy Id: 983506
Other names: R. solani AG-1 IA, Rhizoctonia solani AG-1 IA, Rhizoctonia solani AG-1IA, Rhizoctonia solani AG-1IA SC, Rhizoctonia solani AG1 IA, Rhizoctonia solani AG1 IA SC, Rhizoctonia solani AG1-IA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.