STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AG1IA_05987Glutamate decarboxylase; Belongs to the group II decarboxylase family. (548 aa)    
Predicted Functional Partners:
AG1IA_07766
NAD-specific glutamate dehydrogenase.
   
 
 0.860
AG1IA_05182
Pantothenate synthetase.
  
 
 0.847
AG1IA_04857
Phosphoglucomutase; Belongs to the phosphohexose mutase family.
  
  
 0.829
AG1IA_00251
His4p.
    
 0.811
AG1IA_01014
Tryptophan synthase.
    
 0.801
AG1IA_04169
Sim15.
   
 0.799
AG1IA_00267
Succinate-semialdehyde dehydrogenase.
   
 0.795
AG1IA_08343
Protein ura1.
    
 0.788
AG1IA_05754
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
   
  
 0.788
AG1IA_07649
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.785
Your Current Organism:
Rhizoctonia solani AG1IA
NCBI taxonomy Id: 983506
Other names: R. solani AG-1 IA, Rhizoctonia solani AG-1 IA, Rhizoctonia solani AG-1IA, Rhizoctonia solani AG-1IA SC, Rhizoctonia solani AG1 IA, Rhizoctonia solani AG1 IA SC, Rhizoctonia solani AG1-IA
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