STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AG1IA_05774SPT2 domain-containing protein. (545 aa)    
Predicted Functional Partners:
AG1IA_08758
Ras domain-containing protein.
   
 0.877
AG1IA_09387
Class V myosin (Myo4), putative; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.836
AG1IA_05407
SNARE protein SED5/Syntaxin 5.
    
 0.811
AG1IA_09086
Putative polysaccharide deacetylase from carbohydrate esterase family CE10.
    
 
 0.769
AG1IA_02746
Serine/threonine-protein kinase.
   
 0.767
AG1IA_05950
Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament.
    
 0.762
AG1IA_05320
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.
    
 0.756
AG1IA_03091
DUF2461 domain-containing protein.
    
  0.751
AG1IA_05773
Actin binding protein; Belongs to the actin family.
    
 0.745
AG1IA_04149
Cyclin-dependent protein kinase inhibitor.
    
 0.743
Your Current Organism:
Rhizoctonia solani AG1IA
NCBI taxonomy Id: 983506
Other names: R. solani AG-1 IA, Rhizoctonia solani AG-1 IA, Rhizoctonia solani AG-1IA, Rhizoctonia solani AG-1IA SC, Rhizoctonia solani AG1 IA, Rhizoctonia solani AG1 IA SC, Rhizoctonia solani AG1-IA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.