STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AG1IA_05357C5-DNA-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (1230 aa)    
Predicted Functional Partners:
AG1IA_02246
YDG/SRA domain-containing protein.
  
 0.979
AG1IA_04724
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
   0.944
AG1IA_05481
SET domain-containing protein.
   
 0.941
AG1IA_01159
Ubiquitin hydrolase, putative; Belongs to the peptidase C19 family.
   
 
 0.920
AG1IA_01867
Ubiquitin.
    
 
 0.884
AG1IA_03440
Spindle pole body component.
    
 0.879
AG1IA_07586
Spc97/spc98 family domain-containing protein.
    
 0.870
AG1IA_04755
Histone H3.
    
 0.866
AG1IA_04350
Histone H3; Belongs to the histone H3 family.
    
 0.866
AG1IA_02157
Histone 3.
    
 0.866
Your Current Organism:
Rhizoctonia solani AG1IA
NCBI taxonomy Id: 983506
Other names: R. solani AG-1 IA, Rhizoctonia solani AG-1 IA, Rhizoctonia solani AG-1IA, Rhizoctonia solani AG-1IA SC, Rhizoctonia solani AG1 IA, Rhizoctonia solani AG1 IA SC, Rhizoctonia solani AG1-IA
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