STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AG1IA_05182Pantothenate synthetase. (414 aa)    
Predicted Functional Partners:
AG1IA_04002
3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate.
 
 0.996
AG1IA_09442
3-methyl-2-oxobutanoate hydroxymethyltransferase PanB.
 
 0.987
AG1IA_09111
PRK domain-containing protein.
     
 0.850
AG1IA_00887
Phosphopantothenate-cysteine ligase.
  
 
 0.849
AG1IA_05987
Glutamate decarboxylase; Belongs to the group II decarboxylase family.
  
 
 0.847
AG1IA_06107
ApbA domain-containing protein.
     
 0.841
AG1IA_09154
Phosphopantothenoylcysteine decarboxylase.
  
 
 0.821
AG1IA_03249
Thymidylate synthase.
  
 
 0.821
AG1IA_01275
Branched-chain alpha-keto acid dehydrogenase E1-alpha subunit.
     
 0.792
AG1IA_04807
Aminotransferase class-III domain-containing protein.
     
 0.790
Your Current Organism:
Rhizoctonia solani AG1IA
NCBI taxonomy Id: 983506
Other names: R. solani AG-1 IA, Rhizoctonia solani AG-1 IA, Rhizoctonia solani AG-1IA, Rhizoctonia solani AG-1IA SC, Rhizoctonia solani AG1 IA, Rhizoctonia solani AG1 IA SC, Rhizoctonia solani AG1-IA
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