STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AG1IA_04946Zf-CCCH domain-containing protein. (172 aa)    
Predicted Functional Partners:
AG1IA_00283
Developmentally regulated GTP binding protein 1.
   
 
 0.991
AG1IA_01495
Ferrous iron transport domain-containing protein.
   
 
 0.950
AG1IA_07030
Elongation factor 3.
   
 
 0.933
AG1IA_02452
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
   0.886
AG1IA_00274
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
   
   0.880
AG1IA_07745
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
   
   0.874
AG1IA_00847
Guanine nucleotide binding protein beta subunit.
   
   0.869
AG1IA_00596
60S ribosomal protein L5.
   
   0.860
AG1IA_02990
mRNA export factor elf1.
   
 
 0.847
AG1IA_02991
mRNA export factor elf1.
   
 
 0.847
Your Current Organism:
Rhizoctonia solani AG1IA
NCBI taxonomy Id: 983506
Other names: R. solani AG-1 IA, Rhizoctonia solani AG-1 IA, Rhizoctonia solani AG-1IA, Rhizoctonia solani AG-1IA SC, Rhizoctonia solani AG1 IA, Rhizoctonia solani AG1 IA SC, Rhizoctonia solani AG1-IA
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.